sciquence.sequences.pseqi

sciquence.sequences.pseqi(array)

Get list of positive sequences indices (consisting of ones)

Parameters:array (ndarray) – Numpy array Returns:

• seq_list (list of ndarray) – List of sequences
• idx_list (list of ndarray) – List of seqences indices

Examples

>>> import sciquence.sequences as sq
>>> import numpy as np
>>> x = np.array([1, 1, 1, 1, 1, 1, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 0, 0, 0, 0])
>>> print sq.seqi(x)
[array([0, 1, 2, 3, 4, 5]), array([12, 13, 14, 15, 16])]