sciquence.sequences.nseqi

sciquence.sequences.nseqi(array)

Get list of negative sequences indices (consisting of zeroes)

Parameters:array (ndarray) – Numpy array Returns:

• seq_list (list of ndarray) – List of sequences
• idx_list (list of ndarray) – List of seqences indices

Examples

>>> import sciquence.sequences as sq
>>> import numpy as np
>>> x = np.array([1, 1, 1, 1, 1, 1, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 0, 0, 0, 0])
>>> print sq.seqi(x)
[array([ 6,  7,  8,  9, 10, 11]), array([17, 18, 19, 20])]